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covid-data-model's Introduction

COVID-19 Data Model

Objective: Provide a library/API that ingests COVID-19 data to provide simulated outcomes based on local isolation/quarantine policy levers as represented in published models.

Check It Out in Jupyter Binder

Resources

Models

Data Sources

See covid-data-public for data sources being used or considered.

Running

Run website data deploy

This will run all models and generate data needed for the website, outputting to ../covid-projections/public/data.

./deploy_website.sh

Run DoD dataset deploy

Run all models, generate DoD datasets, output to ./dod_results/ folder:

./deploy_dod.sh

Run all models, generate DoD datasets, upload the files to S3 bucket specified by BUCKET_NAME.

BUCKET_NAME=<bucket name> ./deploy_dod.sh

If you've previously ran the full model, you can just re-run the DoD dataset part via:

# Output artifacts locally to dod_results/:
python deploy_dod_dataset.py
# Upload artifacts to S3 bucket:
BUCKET_NAME=<bucket name> python deploy_dod_dataset.py

covid-data-model's People

Contributors

crwilcox avatar davidstrauss avatar fridiculous avatar ghop02 avatar goldblatt avatar gsoltis avatar igorkofman avatar jamestamplin avatar jredding avatar mikelehen avatar playermanny2 avatar raphomet avatar traethethird avatar tsebens avatar vincentwoo avatar

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