Name: Spencer Bliven
Type: User
Company: Paul Scherrer Institute
Bio: Bioinformatician & Open source developer. Interests in computational biology, machine learning, visualization, 3D printing, and mathematics.
Location: Zurich, Switzerland
Blog: https://spencer.bliven.us
Spencer Bliven's Projects
Scripts to search for specific peptide sequences in the PDB
App for solving grid-based puzzles like Sudoku and Kenken
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
Collected scripts for Pymol
Mac OSX plugins to quickly pre-view files in Electron Microscopy
Gaussian Mixture Model for ramachandra plots
The git mirror of the biojava based RCSB Viewers
DO NOT FORK! Use biojava/rcsb-sequenceviewer instead
Python interface for the RCSB search API.
Python library to interface with RepeatsDB
A jupyter kernel for interactive SaC development
LilyBee.ch
Simple project scaffolding for Python
Algorithms and tools for bioinformatics and life science informatics written in Scala
This repository holds validation schemas for CFF
SciCat Data Catalogue Backend
CI related information to deploy SciCat
Documentation for SciCat metadata server :page_with_curl:
SciCat open data catalogue web client
Client for PSI SciCat (discovery.psi.ch)
An Arduino library for controlling 7-segment displays. Migrated from https://bitbucket.org/sbliven/sevensegment
svg.rb, the SVG importer plugin for Sketchup 6+
A plugin for Bukkit based Minecraft server that adds a floating island dimension similar to the old skylands.
Provides high-density compression and decompression of biomolecular structures.
Java Sudoku tool
Modified Shapefile for Swiss Cantons
Artful mathematics following Frank Farris's "Creating Symmetry"
Detect, analyze, and visualize protein symmetry
Benchmarks for testing the symmetry package
Shell project to create binaries for symmetry executables