Comments (6)
falexwolf
commented on July 18, 2024
1
The default option in sc.pl.scatter should be use_raw=None which defaults to looking up .raw if it exists and not looking it up otherwise. This is indeed the current behaviour even though the default is use_raw=True. I can easily change this, I think, without breaking anything. So I'll go ahead and do it.
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Koncopd
commented on July 18, 2024
Added this 4148828
I also believe that it should be use_raw=False (not it is True) as the default option in scatter...
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falexwolf
commented on July 18, 2024
This would be the corresponding commit: scverse/scanpy@9a7c0a9
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gokceneraslan
commented on July 18, 2024
Cool! That makes a lot of sense...
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github-actions
commented on July 18, 2024
This issue has been automatically marked as stale because it has not had recent activity.
Please add a comment if you want to keep the issue open. Thank you for your contributions!
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flying-sheep
commented on July 18, 2024
this is fixed
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