The repo is to have the practical assessment of EMBL_EBI

You will need:

• embl_ebi_practical_test source code
• Java JDK
• Apache Maven
  • https://maven.apache.org
  • Maven on Windows
• A Unix/Linux shell environment OR the Windows command line

If you are working from the Windows command line you must also install a Java JDK, and set the JAVA_HOME environment variable (please ensure it points to the JDK, and not the JRE) and the MVN_HOME environment variable. You may need to reboot your machine after setting these environment variables.

Ensure that you set your MAVEN_HOME environment variable, for example:

MAVEN_HOME=E:\Downloads\apache-maven-3.5.4-bin\apache-maven-3.5.4\

NOTE: 1.You can use Maven directly 2.application.properties has the db details and port number

and for any permission related item, Please use chmod command to give the permission in linux or mac machines in the terminal.

To build the application from source clone or unzip the application and from navigate to the root directory.

mvn clean install -DskipTests

To run all tests, use:

mvn clean install

To run embl_ebi_practical_test from the command line (assuming you have been able to build from the source code successfully)

run.bat or java -jar  target\restfulmicroservice-0.0.1-SNAPSHOT.jar

Application: http://localhost:8080/swagger-ui.html

H2: http://localhost:8080/h2-console/

Use Auth controller to login with pre defined user and password

Jwt token is integrated. Use Authcontroller. Refer Swagger

username: user password: password

username: admin password: password

enter the token in the auth header 'Authorization: Bearer {{token}}' to proceed with api

embl_ebi_practical_test' source comes with Maven configuration files which are recognized by Eclipse if the Eclipse Maven plugin (m2e) is installed.

At the command line, go to a directory not under your Eclipse workspace directory and check out the source:

git clone https://github.com/selvapuram/embl_ebi_practical_test.git

As embl_ebi_practical_test comes with some jars that need to be installed in Maven, run mvn clean install to install these first. (This only needs to be done once on your system.) Then in Eclipse, invoke the Import... command and select Existing Maven Projects.

Choose the root directory of your clone of the repository.

To run and debug embl_ebi_practical_test from STS(Spring Tool Suite), spring boot dashboard has everything to run and debug.

You can run the server tests directly from Eclipse. right click on the source folder , select Run As -> Junit Test. This should open a new tab with the junit launcher running the embl_ebi_practical_test service tests.

The current project has been deployed using heroku environment. It has been connected with github and pipeline has been setup. Staging only.

https://restfulmicroservices.herokuapp.com/swagger-ui.html