reporting proportion of unmatched reads about kmcp HOT 4 CLOSED

Hi Peter, thanks for you using KMCP.

kmcp search reports the proportion of matched reads.

10:01:29.112 [INFO] processed queries: 595188, speed: 2.135 million queries per minute
10:01:29.112 [INFO] 100.0000% (595188/595188) queries matched
10:01:29.112 [INFO] done searching

And kmcp search shows the number and proportion of reads belonging to targets in the profile.

10:04:30.308 [INFO] #input matched reads: 595189, #reads belonging to references in profile: 595189, proportion: 100.000000%

Maybe kmcp search could write the basic summary to the search result file as comment lines, then kmcp search shall read and report them again.

from kmcp.

Many thanks for the quick answer! Yes I can see the reporting in the stderr output.

Best regards,

Peter

from kmcp.

Maybe kmcp search could write the basic summary to the search result file as comment lines, then kmcp search shall read and report them again.

I may not do this, cause it's difficult for kmcp profile to read the comment lines.

from kmcp.

I'll implement this. #33

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