Comments (3)
Sorry for the inconvenience, something is wrong with the service of browsing the shared directory. But the links to individual files are accessible.
DB | source | #species | #assemblies | parameters | archive file | size |
---|---|---|---|---|---|---|
Bacteria and Archaea | GTDB r202 | 28073+ | 47894 | k=21, chunks=10; fpr=0.3, hashes=1 |
gtdb.kmcp.tar.gz (50.34 GB, md5), CowTransfer link (md5) |
58.03 GB |
Bacteria and Archaea | HumGut | 1594+ | 30691 | k=21, chunks=10; fpr=0.3, hashes=1 |
humgut.kmcp.tar.gz (18.77 GB, md5), CowTransfer link (md5) |
21.52 GB |
Fungi | Refseq r208 | 398 | 403 | k=21, chunks=10; fpr=0.3, hashes=1 |
refseq-fungi.kmcp.tar.gz (3.68 GB, md5), CowTransfer link (md5) |
4.18 GB |
Viruses | GenBank 246 | 23632 | 27936 | k=21, chunks=10; fpr=0.05, hashes=1 |
genbank-viral.kmcp.tar.gz (1.25 GB, md5), CowTransfer link (md5) |
4.72 GB |
Human | CHM13 | 1 | 1 | k=21, chunks=1024; fpr=0.3, hashes=1 |
human-chm13.kmcp.tar.gz (818 MB, md5), CowTransfer link (md5) |
946 MB |
Let me know if there's any issue.
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Thank you for quick reply. It turns out the problem was caused by Microsoft Edge browser. Chrom works perfectly!
If download from something like ftp server is possible, it would be even greater!
from kmcp.
CowTransfer links are fixed by the service provider.
Sorry, we don't have a server with a public IP address.
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Related Issues (20)
- kmcp search crashed HOT 5
- TODO: support viral genomes collections, e.g, MGV, GPD HOT 3
- Building database with MAGs HOT 2
- Automatically disable ambiguous-matches correction for complex communities with thousands of species
- QUESTION: KMCP merge HOT 4
- QUESTION: Taxdump HOT 2
- Error when installing KMCP HOT 9
- compiling/installing from source HOT 9
- Create an index without create the database HOT 4
- 0.8.3: Fails on i386: 1 << 32 - 1 (untyped int constant 4294967295) overflows int HOT 4
- reporting proportion of unmatched reads HOT 4
- Profiling output table interpretation HOT 3
- kmcp search is very slow for metatranscriptome data HOT 6
- KMCP database building tutorial HOT 3
- Dealing with novel/non-sequenced species HOT 2
- long read metagenomic profiling HOT 2
- TODO: improve search results parsing by using a simplified version of strconv.ParseFloat HOT 1
- A minor issue on console messages HOT 3
- [website] broken links HOT 1
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