shubhamkrpandey19 Goto Github PK
Name: Shubham Pandey
Type: User
Company: University of Idaho
Bio: Graduate Research Scholar at University of Idaho
Twitter: shubh_pandey7
Location: Moscow, ID
Name: Shubham Pandey
Type: User
Company: University of Idaho
Bio: Graduate Research Scholar at University of Idaho
Twitter: shubh_pandey7
Location: Moscow, ID
Implementation of Protein Classification based on subcellular localization using ProtBert(Rostlab/prot_bert_bfd_localization) model from Hugging Face library, based on BERT model trained on large corpus of protein sequences.
Message Passing Neural Networks for Molecule Property Prediction
Data science case studies and machine learning models on various publicly available datasets
The script is designed in such a way to extract useful information from the .log (Gaussian output files). Gaussian output files contains cumbersome amount of information that can't be extracted easily using grep and awk function in command line.
This bash script requires gromacs and python installed on your system.
Plotting graphs from XVGs generated by GROMACS in Python
GNN for predicting absorption spectra. Architecture uses Message Passing Framework to understand molecular features.
Image classification models based on well establish and freely accessible NN architechtures.
SMILES converted into Graphs that contains atomic information, bonding informatics. Graphs considered as input for the NN to Predict Melting Pont of Liquid Crystals (LCs)
An implementation of modified K-Means clustering on Biological Data (Proteins).
This repository will help you to screen large library of molecules at early stage. This repo comprises 3 notebooks that split large sdf files into smaller sets that are easy to handle, similarity_check_rdkit that uses tanimoto coefficeient to screen the libraries against your target structure.
a molecular descriptor calculator
Objective-Reinforced Generative Adversarial Networks (ORGAN) for Sequence Generation Models
The prediction_script will enable you to predict whether your query protein sequence is cardiotoxic, neurotoxic, and/or enterotoxic.
ProteinTox, a web based application that brings you a platform to predict Protein toxicity using Machine Learned approach.
MLP regression of protein sequences
Convert SMILES chemical annotation into .png image file
Project Name: Spike Sensor
This is the repository for the variant impact predictor VarIpred.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.