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Hi there, I'm Shujia Huang! 👋

Hi, I'm Shujia Huang, a bioinformatician, human genome researcher and programmer from China. My primary research interests lie in statistical modeling, bioinformatic method development and data analysis in human genetics and genomics:

Shujia Huang's Projects

hgpp icon hgpp

Human Genome Haplotype resolved Program Package

ilus icon ilus

A handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.

june icon june

June is a forum (Deprecated)

ngs icon ngs

code for next-generation sequencing

ngslib icon ngslib

A C++ library for reading high-throughput sequencing data.

pmvcf icon pmvcf

A simple Perl module for parsing and manipulating VCF files

primerdesigner icon primerdesigner

A quick tool for automating primer3 design and primer specificity check workflow

pumpkin-book icon pumpkin-book

《机器学习》(西瓜书)公式推导解析,在线阅读地址:https://datawhalechina.github.io/pumpkin-book

pyvcf icon pyvcf

A Variant Call Format reader for Python.

qmplot icon qmplot

A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.

refhap icon refhap

A Reliable and Fast Algorithm for Single Individual Haplotyping

sickle icon sickle

Windowed Adaptive Trimming for fastq files using quality

soapaligner icon soapaligner

SOAPaligner(also named soap2) is a member of the SOAP (Short Oligonucleotide Analysis Package). It is an updated version of SOAP software for short oligonucleotide alignment.

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