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I am impressed by your tool and eager to leverage its capabilities in my research. Using a reciprocal cross design, I have generated stem cell lines from two distinct mouse strains with characterized SNPs. I have performed scRNA-seq on these cell lines from both reciprocal crosses. I am specifically interested in identifying imprinted genes within this dataset using your program. Can you please advise on the best approach to integrate my SNP and scRNA-seq data into your tool for this purpose?

Thank you!

Hi Anna,

Is it possible that you share the processed data of single cell RNA seq with both spliced and un-spliced counts? Thank you.

Weikang

Hello,
In the metadata file in Zenodo I see a lot of information but no accession information. How can I find the corresponding fastq files of a given sample?
Thank you!