A derivation of Tempo.

Some nice adagios.

• Make sure to clone with --recurse-submodules.

• See docs/installation.md for more info. Specifically need to install nextflow in bin.

To resume a run use the following script template:

#!/bin/bash

export NXF_SINGULARITY_CACHEDIR=/rtsess01/compute/juno/bic/ROOT/opt/singularity/cachedir_socci
export TMPDIR=/scratch/socci
export PATH=$PROJECT_ROOT/adagio/bin:$PATH

nextflow run $PROJECT_ROOT/adagio/tempo/dsl2.nf -resume \
# args from .nextflow/history

(sample version of this in /scripts folder). Remember you need to delete/move the trace.txt, *.html, and *.tsv files. Do

mkdir passN
mv trace.txt *.html *.tsv passN