Comments (1)
same as #148
from spinalcordtoolbox.
Related Issues (20)
- Dipy denoising functions are duplicated between `sct_maths` and `sct_denoising_onlm`/`sct_dmri_denoise_patch2self`
- Get rid of calls to `inspect.stack` HOT 1
- Input requirements for `-x label` are unclear (what is a "single-voxel label"?) HOT 6
- sct_run_batch does not seem robust to BIDS format HOT 3
- `portalocker` error when running `sct_qc` with a large number of jobs in parallel HOT 7
- Develop new method to register odd and even chunks on 3D volumes HOT 3
- The threshold parameter of `sct_deepseg` doesn't work with the model `seg_sc_contrast_agnostic` for soft segmentation. HOT 8
- Thresholding during image registration
- `RuntimeError: PytorchStreamReader` when running `sct_deepseg` on contrast agnostic model HOT 4
- `sct_deepseg -task seg_spinal_rootlets_t2w` raises `unexpected keyword argument 'perform_everything_on_device'` error HOT 3
- Output softseg from MONAI inference is not in the range `[0, 1]` HOT 4
- Update contrast-agnostic model to 2.4 HOT 1
- Mask creation is no more required for cropping
- Provide better instructions when Windows username contains spaces HOT 3
- macOS runners take an inconsistent amount of time to run, sporadically triggering the `-h` profiling test
- FileNotFoundError: when using `type=im` with `algo=centermassrot` HOT 6
- Indicate deepseg model HOT 1
- Is `line_angle()` still available in QC for looking at HOG performance? HOT 2
- Improve angle estimation for slicewise registration
- Replace deepseg MS lesion seg model
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from spinalcordtoolbox.