Code for analysis of data from various screens in R:
plate_annotate.r
annotates 96- or 384-well plates given a layout [e.g.: A1-H6 control, A7-H12 treated, A1-D12 cell line 1, E1-H12 cell line 2] for easier factorisation and plotting in R.edge.r
Implementation of edgeR for barcoded pooled screen data and wrappers for plotting and hit lists.p1112screen.r
Analysis and plots of plate 11/12 drug screens.