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bentsherman avatar bentsherman commented on August 29, 2024

Workflow of BioDep-Vis

main
- parse command-line arguments
- read go-basic.obo [-> readOntFile()]
- create GLUI window
- create graphs, alignments from input.json [-> init() -> parser()]
- initialize Camera, GL functions [-> init()]

readOntFile
- read id, name, def for each term into ontStruct
- insert each term into ontologyDB map

parser
- construct Graph for each graph term [-> Graph()]
- construct Alignment for each alignment term [-> Alignment()]

init
- create Camera
- bunch of gl code

Graph
- load graph file [-> readGraph()]
- load cluster file [-> clusterization()]
- load ontology file [-> readOntology()]

Alignment
- load alignment file [-> readFile()]

from biodepvis.

bentsherman avatar bentsherman commented on August 29, 2024

BioDepVis has been refactored with Qt, with the exception of the ROI feature. For now we will keep the old code, and we may implement this feature if it is deemed useful.

from biodepvis.

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