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alphafold

Open source code for AlphaFold.

calendar_updater

Get schedule, update calendar

chainer

A flexible framework of neural networks for deep learning

chainer-chemistry

Chainer Chemistry: A Library for Deep Learning in Biology and Chemistry

chainercv

ChainerCV: a Library for Deep Learning in Computer Vision

consensus_creator

Make consensus sequence from FASTA file

cuemol2

CueMol: Molecular Visualization Framework

denoising-diffusion-pytorch

Implementation of Denoising Diffusion Probabilistic Model in Pytorch

docker

Docker - the open-source application container engine

flexaid

Flexible Artificial Intelligence Docking

fsecplotter

automated plotter for FSEC users

fsecplotter2

New version of (Shimazu/Hitachi) FSCEplotter written in Python3 and PyQt5

gitignore

A collection of useful .gitignore templates

gridscanninghelper

for BL32XU users...

img_classifying

ipythonnotebook_collection

kusoscripts

labwikipublicationupdator

LabWikiPublicationUpdator

looking-to-listen-at-the-cocktail-party

Executable code based on Google articles

mdtools

scripts to analyze MD trajectory

mdtraj

An open library for the analysis of molecular dynamics trajectories

nico_download

niconico

wrapper of Mechanize, optimized for nicovideo.

niconico_dl

ニコニコ動画の動画のダウンロードをするためのPython用モジュール。

nndownload

Download and process links from Niconico (nicovideo.jp)

openmm

OpenMM is a toolkit for molecular simulation using high performance GPU code.

openmmtools

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

pyemma

🚂 Python API for Emma's Markov Model Algorithms 🚂

pymbar

Python implementation of the multistate Bennett acceptance ratio (MBAR)

pyswarms

A research toolkit for particle swarm optimization in Python