Giter VIP home page Giter VIP logo

scabsolute's Introduction

scAbsolute

Schneider, Michael P., et al. 2024.
scAbsolute: Measuring Single-Cell Ploidy and Replication Status.
Genome Biology 25 (1): 62.
https://doi.org/10.1186/s13059-024-03204-y.

Measuring single-cell ploidy and cell cycle status in single-cell DNA sequencing data. Please see the manuscript for details.

This repository contains the source code for the scAbsolute software and scripts to replicate the figures in the manuscript.

In order to run the code, to see examples of how to use the package and an easy-to-use workflow, we recommend using the lab's single-cell sequencing pipeline.

scabsolute's People

Contributors

leachim avatar austinreed-1 avatar tbradley27 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.