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how-did-it-die's Issues

Property: underlyingCausesOfDeath

Definition Any underlying or secondary diseases, conditions or circumstances leading directly to death of the organism
Existing property
Existing class
Existing property identifier
Format Text
Required no
Repeatable no
Constraints none
Examples starvation, injury, shot
Notes Generally intended to be used with a dwc:basisOfRecord of PreservedSpecimen, MaterialSample, or HumanObservation and with the core property vitality and extension property causeOfDeath.

Use Case: BeachCOMBERS

CenCOOS has a dataset of volunteer based surveys of marine mammal and seabird carcasses that wash-up on beaches. https://mlml.sjsu.edu/beachcombers/

I believe all records in this dataset would use:
vitality property with the vocabulary term "dead"

I'm not sure any of the other associated terms would be able to be implemented (causeOfDeath, underlyingCausesOfDeath, deathDate). The term vitalityRemarks if that is a general comments type of field.

cc'ing CenCOOS folks @patcdaniel and @dianalg in case they have anything to add or just want to follow along.

Property: vitalityRemarks

Definition Comments or notes on the conditions contributing to the death
Existing property
Existing class
Existing property identifier
Format Text
Required no
Repeatable no
Constraints no
Examples The animal was injured and starved to death
Notes Generally intended to be used with a dwc:basisOfRecord of PreservedSpecimen, MaterialSample, or HumanObservation and with the core property vitality

Property: causeOfDeath

Definition The primary or immediate disease or condition resulting in the death of the organism
Existing property
Existing class
Existing property identifier
Format Text
Required no
Repeatable no
Constraints controlled vocabulary
Examples Road kill, stranding, starvation
Notes Generally intended to be used with a dwc:basisOfRecord of PreservedSpecimen, MaterialSample, or HumanObservation and with the core property vitality.

Please add your feedback on the controlled vocabulary to this issue: #7

Property: deathDate

Definition The date the organism died
Existing property
Existing class
Existing property identifier
Format Date
Required no
Repeatable no
Constraints ISO 8601 date format, resolved to day, month or year
Examples
Notes Date ranges are allowed. Generally intended to be used with a dwc:basisOfRecord of PreservedSpecimen, MaterialSample, or HumanObservation and with the core property vitality.

Property:vitality

Definition An indication of whether the organism was alive or dead at the time of collection or observation
Existing property
Existing class
Existing property identifier
Format Text
Required yes
Repeatable no
Constraints controlled vocabulary
Examples alive, dead , unable to determine, not recorded
Notes Generally intended to be used with a dwc:basisOfRecord of PreservedSpecimen, MaterialSample, or HumanObservation.

Please add your feedback on the controlled vocabulary to this issue: #6

Use Case: ESB-TCN live-dead use and augmentation

"Mobilizing Millions of Marine Mollusks of the Eastern Seaboard" TCN is using vitality information to inform studies of biotic change. From the grant proposal "...Important trait data will also be incorporated. For the first time, molluscan occurrence data will distinguish between live- and dead-collected specimens, with a defined vocabulary for traits added to each record. Due to the long persistence of molluscan shells, the live/dead- collected distinction is crucial for all studies of biotic change using mollusks. Information on collecting dates will be refined where possible to increase resolution for detecting biotic changes. The data will be shared through public data repositories, including iDigBio, GBIF, OBIS, and the InvertEBase Symbiota portal." https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001510

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