Setup webservices that sends data from the hdf5 file to the client for geojson, taxonomic similarity between samples, taxonomy burst charts etc

Default values can now be saved from the term mapper - they should be stored in the group metadata in the BIOM 2.1. files, and written as default values to the DWC meta file: https://dwc.tdwg.org/text/

If a user inputs data based on ITS,16s or COI markers, it should be optional to assign kingdom, phylum, order,family, genus, scientificName from the seq id webservice.

We will need a set of cutoff rules for species level (OTU), genus, family etc
i.e. if a match is 97% can we infer the genus and use that as a scientificName ?
Could be sth like:

• > 99% - its a match to the OTU
• 95 - 99% we snap to the genus
• 90 - 95% we snap to the family

Can we use one ruleset for all databases avilable from the seq id backend? Or do we need a ruleset for each database?

https://github.com/josdejong/workerpool

Use case:

1. User have uploaded, mapped and processed data
2. During the review the user finds something is not right
3. User goes back and changes something (replace a file, edit the mapping...)
4. User clicks the process button again

In this scenario, the the BIOM files, DWC files and the Processing report must be wiped before the new processing starts

Endpoint:
https://www.ebi.ac.uk/ols/api/search?q=Marine&groupField=iri&start=0&ontology=envo&rows=100

This should be used to fill values in fields env_broad_scale env_local_scale and env_medium