tomdoel / imagesplit Goto Github PK

See file_descriptor.header_from_descriptor. If file_format is not mhd, we do not load in an original-header file.

Add a flag which allows you to control whether existing files are overwritten

OS: Ubuntu 20.04 LTS
Installation: pip install imagesplit
version: ImageSplit==0.3.1

File used: tiff file
Command: imagesplit --input input_data/b2dc8411c.tiff --out output_data/split_image -s c --format tiff -z --rescale -50 350 --type uchar

Output:
Traceback (most recent call last):
File "/home/user/programs/anaconda3/envs/detctron2/bin/imagesplit", line 8, in
sys.exit(main())
File "/home/user/programs/anaconda3/envs/detctron2/lib/python3.6/site-packages/imagesplit/applications/split_files.py", line 274, in main
test=args.test)
File "/home/user/programs/anaconda3/envs/detctron2/lib/python3.6/site-packages/imagesplit/applications/split_files.py", line 43, in split_file
descriptor_filename, input_file_base, start_index, input_file_base)
File "/home/user/programs/anaconda3/envs/detctron2/lib/python3.6/site-packages/imagesplit/applications/split_files.py", line 74, in specify_input_descriptors
generate_input_descriptors(input_file_base, start_index)
File "/home/user/programs/anaconda3/envs/detctron2/lib/python3.6/site-packages/imagesplit/utils/file_descriptor.py", line 273, in generate_input_descriptors
format_factory)
File "/home/user/programs/anaconda3/envs/detctron2/lib/python3.6/site-packages/imagesplit/utils/file_descriptor.py", line 418, in parse_header
return factory.get_factory(format_string).load_and_parse_header(filename)
AttributeError: type object 'TiffFileReader' has no attribute 'load_and_parse_header'

Other:
I have tried with different TIFF files, even with a smaller 10MB file ranging upto 2GB file size
Error is same.

Am I giving the correct input? ie; TIFF file or should I be giving some header ??

Regards,
Anup

Data types should be definable using different variations of standard notations, e.g. uint8, uchar, MET_UCHAR etc.

Docs should be updated following a successful pypi submission