Topic: copynumber Goto Github
Some thing interesting about copynumber
Some thing interesting about copynumber
copynumber,R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.
User: antoniodefalco
Home Page: https://www.nature.com/articles/s41467-023-36790-9
copynumber,Matrix-like representations of mutation and CN data
Organization: bioconductor
Home Page: https://bioconductor.org/packages/RaggedExperiment
copynumber,Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R
Organization: compepigen
copynumber,CINdex Bioconductor package. Read more here: https://www.bioconductor.org/packages/release/bioc/html/CINdex.html
Organization: icbi
copynumber,accessory scripts for processing varscan somatic/copynumber outputs.
User: poisonalien
copynumber,Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples
User: sebastian-gregoricchio
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