Topic: lineage-tracing Goto Github
Some thing interesting about lineage-tracing
Some thing interesting about lineage-tracing
lineage-tracing,Calculation of clonality (distances) based on color profiles (Saturation, Hue, and Lightness values)
User: asalavaty
Home Page: https://autoclone.erc.monash.edu/
lineage-tracing,Lineage inference from Gene Therapy assays with insertional mutagenesis and somatic mutations
Organization: caravagnalab
Home Page: https://caravagnalab.github.io/lineaGT/
lineage-tracing,Easy-to-use C++ library for the live tracking of lineage and coalescence trees in individual-based forward-in-time simulations.
User: charlesrocabert
lineage-tracing,R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.
User: chenweng1991
Home Page: https://chenweng1991.github.io/redeemR/
lineage-tracing,HERACLES algorithm reconstructs CRISPR-Cas9 lineages with hyperbolic embeddings
User: gil2rok
lineage-tracing,Haplotype-aware CNV analysis from single-cell RNA-seq
Organization: kharchenkolab
Home Page: https://kharchenkolab.github.io/numbat/
lineage-tracing,Analyses of Penter, Borji & Nagler et al., 2023
User: liviuspenter
lineage-tracing,LAML is a maximum likelihood algorithm to infer cell phylogeny from dynamic lineage tracing data
Organization: raphael-group
Home Page: https://raphael-group.github.io/LAML/
lineage-tracing,Documentation associated with preparing and formatting datasets LARRY datasets for ML applications with pytorch / pytorch lightning
Organization: scdiffeq
Home Page: https://www.scdiffeq.com
lineage-tracing,TarCA is an R package used for inferring the number of progenitors of the focal cell population based on the cell phylogeny.
User: shadowdeng1994
lineage-tracing,A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction
Organization: yoseflab
Home Page: https://cassiopeia-lineage.readthedocs.io/en/latest/
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