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docker_anaconda_r_rpy2's Introduction

Anaconda(python), R, rpy2, install Dockerfile.

This Dockerfile install Anaconda, R, rpy2 and other python and r packages.

Usage

docker build -f ./Dockerfile -t <image_name> . 
docker image ls 
docker container run -it -p 8888:8888 --name <container_name> --mount type=bind,src=`pwd`,dst=/workdir <image_name>

jpt_lab bash alias activates jupyter lab.

Snippets

If you want to add snippets, docker container path is /root/.local/share/jupyter then type,

docker container run -it -p 8888:8888 --name <container_name> --mount type=bind,src=`pwd`,dst=/workdir --mount type=bind,src=<host_snippet_path>,dst=/root/.local/share/jupyter <image_name>

If you want to use kite autocompletion, type the following,

bash -c "$(wget -q -O - https://linux.kite.com/dls/linux/current)" 
pip install "jupyter-kite<2.0.0" 
jupyter labextension install "@kiteco/jupyterlab-kite" 

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