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ants_tbss

TBSS (FSL) implementation with ANTs and T1w registration to template

casualmodelling

Causal modelling using python

dnm

Deep normative modeling of neuroimaging data using neural processes for mixed-effect modeling

enigmaimputationprotocol

The ENIGMA Imputation Protocol as a container for your local workstation or high-performance compute cluster

fast_tvb

Fast and parallel C implementation of TVB

magetbrain

Multiple Automatically Generated Templates brain segmentation algorithm

manuscripts

Pre-prints for some of my accepted papers

opentracks

OpenTracks is a sport tracking application that completely respects your privacy.

popmeancosinor

Multivariate population mean cosinor with bootstrap

pycerebralplots

Versatile Multimodal Plotting for MRI Surface and Volume Visualization

pyfreenote

Open source python-based reference manager

pyggseg

r2Py python port of ggseg and ggseg3d

pypyls

A Python implementation of Partial Least Squares (PLS) decomposition

seaborn

Statistical data visualization using matplotlib

sgcca-psychiatry-nosology

simcosinor

Simulations for the cosinor model

sparsemodels

sparsestatsfunc

stratify_noddi

tfce_mediation

Fast regression and mediation analysis of vertex or voxel MRI data with TFCE

tm_addons

Optional components for TFCE_mediation (https://github.com/trislett/TFCE_mediation)

tmi_viewer

Neuroimaging Viewer for TMI files to be used with TFCE_mediation (https://github.com/trislett/TFCE_mediation)

tvb-conversion

tvb-library

The science behind The Virtual Brain