umr-lops / grdwindinversion Goto Github PK
View Code? Open in Web Editor NEWpython library to compute wind speed from GRD SAR images
Home Page: https://cerweb.ifremer.fr/datarmor/doc_sphinx/grdwindinversion/index.html
License: MIT License
python library to compute wind speed from GRD SAR images
Home Page: https://cerweb.ifremer.fr/datarmor/doc_sphinx/grdwindinversion/index.html
License: MIT License
$ SAR_L1-to-L2_wind_processor --input_file /home/datawork-cersat-public/cache/project/sarwing/data/RS2/L1/VV_VH/2022/248/RS2_OK141302_PK1242225_DK1208539_SCWA_20220905_212400_VV_VH_SGF --outputdir ./output_tests/
05/09/2023 16:46:29 INFO main.py(34) input file: /home/datawork-cersat-public/cache/project/sarwing/data/RS2/L1/VV_VH/2022/248/RS2_OK141302_PK1242225_DK1208539_SCWA_20220905_212400_VV_VH_SGF
Traceback (most recent call last):
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/chain/l1_inversion_pip_env/bin/SAR_L1-to-L2_wind_processor", line 8, in <module>
sys.exit(processor_starting_point())
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/main.py", line 55, in processor_starting_point
out_file = makeL2(input_file, out_folder, config_file, overwrite=args.overwrite)
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/inversion.py", line 121, in makeL2
raise FileNotFoundError('config_path do not exists, got %s ' % config_path)
FileNotFoundError: config_path do not exists, got config_RS2.yaml
In the parser it says :
parser.add_argument('--config_file',
help='config file path [if not provided will take config file based on input file]',
python main.py --input_file /home/datawork-cersat-public/provider/asc-csa/satellite/l1/rcm/rcm3/SCLNC/GRD/2023/137/RCM3_OK2554779_PK2560509_1_SCLNC_20230517_132957_VV_VH_GRD/ --outputdir /tmp/
10/07/2023 12:00:44 INFO schemas.py(1234) Resource 'XMLSchema.xsd' is already loaded
/opt/conda-envs/dev/lib/python3.10/site-packages/safe_rcm/product/reader.py:59: UserWarning: Converting non-nanosecond precision datetime values to nanosecond precision. This behavior can eventually be rela
xed in xarray, as it is an artifact from pandas which is now beginning to support non-nanosecond precision values. This warning is caused by passing non-nanosecond np.datetime64 or np.timedelta64 values to
the DataArray or Variable constructor; it can be silenced by converting the values to nanosecond precision ahead of time.
{"timeStamp": ds["timeStamp"].astype("datetime64")}
/opt/conda-envs/dev/lib/python3.10/site-packages/safe_rcm/product/reader.py:68: UserWarning: Converting non-nanosecond precision datetime values to nanosecond precision. This behavior can eventually be rela
xed in xarray, as it is an artifact from pandas which is now beginning to support non-nanosecond precision values. This warning is caused by passing non-nanosecond np.datetime64 or np.timedelta64 values to
the DataArray or Variable constructor; it can be silenced by converting the values to nanosecond precision ahead of time.
{"timeStamp": ds["timeStamp"].astype("datetime64")}
10/07/2023 12:00:48 ERROR io.py(224) FilePath is currently a read-only interface.
10/07/2023 12:00:48 ERROR io.py(224) FilePath is currently a read-only interface.
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'4c0b12dc-4cb1-44b9-9279-d1232838c090/4c0b12dc-4cb1-44b9-9279-d1232838c090.aux'
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'4c0b12dc-4cb1-44b9-9279-d1232838c090/4c0b12dc-4cb1-44b9-9279-d1232838c090.AUX'
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'4c0b12dc-4cb1-44b9-9279-d1232838c090/4c0b12dc-4cb1-44b9-9279-d1232838c090.aux'
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'4c0b12dc-4cb1-44b9-9279-d1232838c090/4c0b12dc-4cb1-44b9-9279-d1232838c090.AUX'
10/07/2023 12:00:48 ERROR io.py(224) FilePath is currently a read-only interface.
10/07/2023 12:00:48 ERROR io.py(224) FilePath is currently a read-only interface.
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'f8fbcc5c-b210-4bd0-9597-7bd55b111071/f8fbcc5c-b210-4bd0-9597-7bd55b111071.aux'
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'f8fbcc5c-b210-4bd0-9597-7bd55b111071/f8fbcc5c-b210-4bd0-9597-7bd55b111071.AUX'
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'f8fbcc5c-b210-4bd0-9597-7bd55b111071/f8fbcc5c-b210-4bd0-9597-7bd55b111071.aux'
10/07/2023 12:00:48 ERROR io.py(224) File-like object not found in virtual filesystem: b'f8fbcc5c-b210-4bd0-9597-7bd55b111071/f8fbcc5c-b210-4bd0-9597-7bd55b111071.AUX'
Traceback (most recent call last):
File "/home1/datahome/agrouaze/sources/git/grdwindinversion/grdwindinversion/main.py", line 48, in <module>
out_file = makeL2(input_file, out_folder, config_file,overwrite=args.overwrite)
File "/home1/datahome/agrouaze/sources/git/grdwindinversion/grdwindinversion/inversion.py", line 120, in makeL2
meta = fct_meta(filename)
File "/home1/datahome/agrouaze/sources/git/xsar/src/xsar/utils.py", line 94, in wrapper
result = f(*args, **kwargs)
File "/home1/datahome/agrouaze/sources/git/xsar/src/xsar/rcm_meta.py", line 93, in __init__
self.manifest_attrs = self._create_manifest_attrs()
File "/home1/datahome/agrouaze/sources/git/xsar/src/xsar/rcm_meta.py", line 196, in _create_manifest_attrs
dic["swath_type"] = os.path.basename(self.path).split('_')[4]
IndexError: list index out of range
SAR_L1-to-L2_wind_processor --input_file /home/datawork-cersat-public/cache/project/sarwing/data/RS2/L1/VV_VH/2022/248/RS2_OK141302_PK1242225_DK1208539_SCWA_20220905_212400_VV_VH_SGF --output_dir ./output_tests/
Traceback (most recent call last):
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/chain/l1_inversion_pip_env/bin/SAR_L1-to-L2_wind_processor", line 5, in <module>
from grdwindinversion.main import processor_starting_point
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/__init__.py", line 7, in <module>
from grdwindinversion import *
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/inversion.py", line 17, in <module>
from load_config import getConf
ModuleNotFoundError: No module named 'load_config'
make html
see at wind raster selection
We can't process HH files ;
https://github.com/umr-lops/xsarsea/blob/b12c73140137ba95197f8693c648c0e2d52bea67/src/xsarsea/windspeed/windspeed.py#L78
2 future solutions =>
need to be done for all vars
Some warnings that we should remove:
grdwindinversion/grdwindinversion/inversion.py:351: UserWarning: rename 'line' to 'owiAzSize' does not create an index anymore. Try using swap_dims instead or use set_index after rename to create an indexed coordinate.
dataset_1000m = dataset_1000m.rename({"line": "owiAzSize", "sample": "owiRaSize"})
grdwindinversion/grdwindinversion/inversion.py:351: UserWarning: rename 'sample' to 'owiRaSize' does not create an index anymore. Try using swap_dims instead or use set_index after rename to create an indexed coordinate.
instead of makeL2_tempo_Vinc
When processing
S1A_EW_GRDM_1SDV_20210930T205405_20210930T205434_039916_04B935_B159.SAFE
11/02/2024 18:56:11 INFO init.py(304) GDAL signalled an error: err_no=1, msg='s1a-ew-grd-vv-20210930t205405-20210930t205434-039916-04b935-001.tiff: TIFFFetchDirectory:/home/datawork-cersat-public/cache/project/mpc-sentinel1/data/esa/sentinel-1a/L1/EW/S1A_EW_GRDM_1S/2021/273/S1A_EW_GRDM_1SDV_20210930T205405_20210930T205434_039916_04B935_B159.SAFE/measurement/s1a-ew-grd-vv-20210930t205405-20210930t205434-039916-04b935-001.tiff: Can not read TIFF directory count'
11/02/2024 18:56:11 INFO init.py(304) GDAL signalled an error: err_no=1, msg='s1a-ew-grd-vv-20210930t205405-20210930t205434-039916-04b935-001.tiff: TIFFReadDirectory:Failed to read directory at offset 102684056'
11/02/2024 18:56:11 INFO inversion.py(493) Traceback (most recent call last):
File "rasterio/base.pyx", line 310, in rasterio.base.DatasetBase.__init
File "rasterio/_base.pyx", line 221, in rasterio._base.open_dataset
File "rasterio/_err.pyx", line 221, in rasterio._err.exc_wrap_pointer
rasterio._err.CPLE_AppDefinedError: s1a-ew-grd-vv-20210930t205405-20210930t205434-039916-04b935-001.tiff: TIFFReadDirectory:Failed to read directory at offset 102684056
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/grdwindinversion/inversion.py", line 476, in makeL2
xsar_dataset = fct_dataset(meta, resolution=resolution,recalibration=recalibration)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xsar/sentinel1_dataset.py", line 135, in init
self.resolution, DN_tmp = self.sar_meta.reader.load_digital_number(resolution=resolution,
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/safe_s1/metadata.py", line 179, in load_digital_number
rio = rasterio.open(files_measurement[0])
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/rasterio/env.py", line 451, in wrapper
return f(args, *kwds)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/rasterio/init.py", line 304, in open
dataset = DatasetReader(path, driver=driver, sharing=sharing, **kwargs)
File "rasterio/base.pyx", line 312, in rasterio.base.DatasetBase.__init
rasterio.errors.RasterioIOError: s1a-ew-grd-vv-20210930t205405-20210930t205434-039916-04b935-001.tiff: TIFFReadDirectory:Failed to read directory at offset 102684056
11/02/2024 18:56:11 ERROR inversion.py(494) s1a-ew-grd-vv-20210930t205405-20210930t205434-039916-04b935-001.tiff: TIFFReadDirectory:Failed to read directory at offset 102684056
Using env :
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
affine 2.4.0 pyhd8ed1ab_0 conda-forge
aiohttp 3.9.1 py310h2372a71_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.10 hd590300_0 conda-forge
aom 3.8.1 h59595ed_0 conda-forge
async-timeout 4.0.3 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 23.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.15 h70caa3e_0 conda-forge
aws-c-cal 0.6.9 h14ec70c_3 conda-forge
aws-c-common 0.9.12 hd590300_0 conda-forge
aws-c-compression 0.2.17 h572eabf_8 conda-forge
aws-c-event-stream 0.4.1 h17cd1f3_5 conda-forge
aws-c-http 0.8.0 hc6da83f_5 conda-forge
aws-c-io 0.14.3 h3c8c088_1 conda-forge
aws-c-mqtt 0.10.1 h0ef3971_3 conda-forge
aws-c-s3 0.5.0 h1b46bed_2 conda-forge
aws-c-sdkutils 0.1.14 h572eabf_0 conda-forge
aws-checksums 0.1.17 h572eabf_7 conda-forge
aws-crt-cpp 0.26.1 h33f84b2_9 conda-forge
aws-sdk-cpp 1.11.242 h65f022c_0 conda-forge
azure-core-cpp 1.10.3 h91d86a7_1 conda-forge
azure-storage-blobs-cpp 12.10.0 h00ab1b0_0 conda-forge
azure-storage-common-cpp 12.5.0 hb858b4b_2 conda-forge
blosc 1.21.5 h0f2a231_0 conda-forge
bokeh 3.3.4 pyhd8ed1ab_0 conda-forge
branca 0.7.1 pyhd8ed1ab_0 conda-forge
brotli 1.1.0 hd590300_1 conda-forge
brotli-bin 1.1.0 hd590300_1 conda-forge
brotli-python 1.1.0 py310hc6cd4ac_1 conda-forge
bzip2 1.0.8 hd590300_5 conda-forge
c-ares 1.26.0 hd590300_0 conda-forge
ca-certificates 2024.2.2 hbcca054_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
cartopy 0.22.0 py310hcc13569_1 conda-forge
certifi 2024.2.2 pyhd8ed1ab_0 conda-forge
cfitsio 4.3.1 hbdc6101_0 conda-forge
cftime 1.6.3 py310h1f7b6fc_0 conda-forge
charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
click-plugins 1.1.1 py_0 conda-forge
cligj 0.7.2 pyhd8ed1ab_1 conda-forge
cloudpickle 3.0.0 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
contourpy 1.2.0 py310hd41b1e2_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cytoolz 0.12.3 py310h2372a71_0 conda-forge
dask 2024.2.0 pyhd8ed1ab_0 conda-forge
dask-core 2024.2.0 pyhd8ed1ab_0 conda-forge
dav1d 1.2.1 hd590300_0 conda-forge
dbus 1.13.6 h5008d03_3 conda-forge
distributed 2024.2.0 pyhd8ed1ab_0 conda-forge
docrep 0.3.2 pyh44b312d_0 conda-forge
elementpath 4.2.1 pypi_0 pypi
exceptiongroup 1.2.0 pypi_0 pypi
expat 2.5.0 hcb278e6_1 conda-forge
ffmpeg 6.1.1 gpl_h8007c5b_104 conda-forge
fiona 1.9.5 py310h0a1e91f_3 conda-forge
folium 0.15.1 pyhd8ed1ab_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_1 conda-forge
fontconfig 2.14.2 h14ed4e7_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.48.1 py310h2372a71_0 conda-forge
freeglut 3.2.2 hac7e632_2 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
freexl 2.0.0 h743c826_0 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
frozenlist 1.4.1 py310h2372a71_0 conda-forge
fsspec 2024.2.0 pyhca7485f_0 conda-forge
future 0.18.3 pyhd8ed1ab_0 conda-forge
gdal 3.8.3 py310he073c5f_2 conda-forge
geopandas 0.14.3 pyhd8ed1ab_0 conda-forge
geopandas-base 0.14.3 pyha770c72_0 conda-forge
geos 3.12.1 h59595ed_0 conda-forge
geotiff 1.7.1 h6b2125f_15 conda-forge
gettext 0.21.1 h27087fc_0 conda-forge
gflags 2.2.2 he1b5a44_1004 conda-forge
giflib 5.2.1 h0b41bf4_3 conda-forge
glib 2.78.3 hfc55251_0 conda-forge
glib-tools 2.78.3 hfc55251_0 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
gmp 6.3.0 h59595ed_0 conda-forge
gnutls 3.7.9 hb077bed_0 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
grdwindinversion 0.2.3.post6 pypi_0 pypi
gst-plugins-base 1.22.9 h8e1006c_0 conda-forge
gstreamer 1.22.9 h98fc4e7_0 conda-forge
harfbuzz 8.3.0 h3d44ed6_0 conda-forge
hdf4 4.2.15 h2a13503_7 conda-forge
hdf5 1.14.3 nompi_h4f84152_100 conda-forge
icu 73.2 h59595ed_0 conda-forge
idna 3.6 pyhd8ed1ab_0 conda-forge
importlib-metadata 7.0.1 pyha770c72_0 conda-forge
importlib-resources 6.1.1 pyhd8ed1ab_0 conda-forge
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lerc 4.0.0 h27087fc_0 conda-forge
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libarrow 15.0.0 he2c5238_2_cpu conda-forge
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libass 0.17.1 h8fe9dca_1 conda-forge
libblas 3.9.0 21_linux64_openblas conda-forge
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libcblas 3.9.0 21_linux64_openblas conda-forge
libclang 15.0.7 default_hb11cfb5_4 conda-forge
libclang13 15.0.7 default_ha2b6cf4_4 conda-forge
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libopencv 4.9.0 py310hc29bc96_7 conda-forge
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libopenvino-paddle-frontend 2023.3.0 hfbc7f12_0 conda-forge
libopenvino-pytorch-frontend 2023.3.0 h59595ed_0 conda-forge
libopenvino-tensorflow-frontend 2023.3.0 h0bff32c_0 conda-forge
libopenvino-tensorflow-lite-frontend 2023.3.0 h59595ed_0 conda-forge
libopus 1.3.1 h7f98852_1 conda-forge
libparquet 15.0.0 h352af49_2_cpu conda-forge
libpciaccess 0.17 h166bdaf_0 conda-forge
libpng 1.6.42 h2797004_0 conda-forge
libpq 16.2 h33b98f1_0 conda-forge
libprotobuf 4.25.1 hf27288f_1 conda-forge
libre2-11 2023.06.02 h7a70373_0 conda-forge
librttopo 1.1.0 h8917695_15 conda-forge
libsndfile 1.2.2 hc60ed4a_1 conda-forge
libspatialindex 1.9.3 h9c3ff4c_4 conda-forge
libspatialite 5.1.0 h7bd4643_4 conda-forge
libsqlite 3.45.1 h2797004_0 conda-forge
libssh2 1.11.0 h0841786_0 conda-forge
libstdcxx-ng 13.2.0 h7e041cc_5 conda-forge
libsystemd0 255 h3516f8a_0 conda-forge
libtasn1 4.19.0 h166bdaf_0 conda-forge
libthrift 0.19.0 hb90f79a_1 conda-forge
libtiff 4.6.0 ha9c0a0a_2 conda-forge
libunistring 0.9.10 h7f98852_0 conda-forge
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libva 2.20.0 hd590300_0 conda-forge
libvorbis 1.3.7 h9c3ff4c_0 conda-forge
libvpx 1.13.1 h59595ed_0 conda-forge
libwebp-base 1.3.2 hd590300_0 conda-forge
libxcb 1.15 h0b41bf4_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxkbcommon 1.6.0 hd429924_1 conda-forge
libxml2 2.12.5 h232c23b_0 conda-forge
libxslt 1.1.39 h76b75d6_0 conda-forge
libzip 1.10.1 h2629f0a_3 conda-forge
libzlib 1.2.13 hd590300_5 conda-forge
llvmlite 0.42.0 py310h1b8f574_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lxml 5.1.0 py310hcfd0673_0 conda-forge
lz4 4.3.3 py310h350c4a5_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
lzo 2.10 h516909a_1000 conda-forge
mapclassify 2.6.1 pyhd8ed1ab_0 conda-forge
markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.5 py310h2372a71_0 conda-forge
matplotlib-base 3.8.2 py310h62c0568_0 conda-forge
mdurl 0.1.2 pyhd8ed1ab_0 conda-forge
minizip 4.0.4 h0ab5242_0 conda-forge
mpg123 1.32.4 h59595ed_0 conda-forge
msgpack-python 1.0.7 py310hd41b1e2_0 conda-forge
multidict 6.0.5 py310h2372a71_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
mysql-common 8.0.33 hf1915f5_6 conda-forge
mysql-libs 8.0.33 hca2cd23_6 conda-forge
ncurses 6.4 h59595ed_2 conda-forge
netcdf4 1.6.5 nompi_py310hba70d50_100 conda-forge
nettle 3.9.1 h7ab15ed_0 conda-forge
networkx 3.2.1 pyhd8ed1ab_0 conda-forge
nspr 4.35 h27087fc_0 conda-forge
nss 3.97 h1d7d5a4_0 conda-forge
numba 0.59.0 py310h7dc5dd1_1 conda-forge
numpy 1.26.4 py310hb13e2d6_0 conda-forge
ocl-icd 2.3.1 h7f98852_0 conda-forge
ocl-icd-system 1.0.0 1 conda-forge
opencv 4.9.0 py310h1bdf985_7 conda-forge
openh264 2.4.1 h59595ed_0 conda-forge
openjpeg 2.5.0 h488ebb8_3 conda-forge
openssl 3.2.1 hd590300_0 conda-forge
orc 1.9.2 h7829240_1 conda-forge
p11-kit 0.24.1 hc5aa10d_0 conda-forge
packaging 23.2 pyhd8ed1ab_0 conda-forge
pandas 2.2.0 py310hcc13569_0 conda-forge
partd 1.4.1 pyhd8ed1ab_0 conda-forge
pcre2 10.42 hcad00b1_0 conda-forge
pillow 10.2.0 py310h01dd4db_0 conda-forge
pip 24.0 pyhd8ed1ab_0 conda-forge
pixman 0.43.2 h59595ed_0 conda-forge
poppler 24.02.0 h590f24d_0 conda-forge
poppler-data 0.4.12 hd8ed1ab_0 conda-forge
postgresql 16.2 h7387d8b_0 conda-forge
proj 9.3.1 h1d62c97_0 conda-forge
psutil 5.9.8 py310h2372a71_0 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
pugixml 1.14 h59595ed_0 conda-forge
pulseaudio-client 16.1 hb77b528_5 conda-forge
py-opencv 4.9.0 py310h5f968ed_7 conda-forge
pyarrow 15.0.0 py310hf9e7431_2_cpu conda-forge
pyarrow-hotfix 0.6 pyhd8ed1ab_0 conda-forge
pygments 2.17.2 pyhd8ed1ab_0 conda-forge
pyparsing 3.1.1 pyhd8ed1ab_0 conda-forge
pyproj 3.6.1 py310hd5c30f3_5 conda-forge
pyshp 2.3.1 pyhd8ed1ab_0 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
python 3.10.13 hd12c33a_1_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-tzdata 2023.4 pyhd8ed1ab_0 conda-forge
python_abi 3.10 4_cp310 conda-forge
pytz 2024.1 pyhd8ed1ab_0 conda-forge
pyyaml 6.0.1 py310h2372a71_1 conda-forge
qt-main 5.15.8 h450f30e_18 conda-forge
rasterio 1.3.9 py310hedc89e0_2 conda-forge
rdma-core 50.0 hd3aeb46_0 conda-forge
re2 2023.06.02 h2873b5e_0 conda-forge
readline 8.2 h8228510_1 conda-forge
regex 2023.12.25 py310h2372a71_0 conda-forge
requests 2.31.0 pyhd8ed1ab_0 conda-forge
rich 13.7.0 pyhd8ed1ab_0 conda-forge
rioxarray 0.15.1 pyhd8ed1ab_0 conda-forge
rtree 1.2.0 py310hbdcdc62_0 conda-forge
s2n 1.4.3 h06160fa_0 conda-forge
scikit-learn 1.4.0 py310h1fdf081_0 conda-forge
scipy 1.12.0 py310hb13e2d6_2 conda-forge
setuptools 69.0.3 pyhd8ed1ab_0 conda-forge
shapely 2.0.2 py310hc3e127f_1 conda-forge
shellingham 1.5.4 pyhd8ed1ab_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
snappy 1.1.10 h9fff704_0 conda-forge
snuggs 1.4.7 py_0 conda-forge
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
sqlite 3.45.1 h2c6b66d_0 conda-forge
svt-av1 1.8.0 h59595ed_0 conda-forge
tbb 2021.11.0 h00ab1b0_1 conda-forge
tblib 3.0.0 pyhd8ed1ab_0 conda-forge
threadpoolctl 3.2.0 pyha21a80b_0 conda-forge
tiledb 2.19.1 h4386cac_0 conda-forge
tk 8.6.13 noxft_h4845f30_101 conda-forge
toolz 0.12.1 pyhd8ed1ab_0 conda-forge
tornado 6.3.3 py310h2372a71_1 conda-forge
typer 0.9.0 pyhd8ed1ab_0 conda-forge
typing-extensions 4.9.0 hd8ed1ab_0 conda-forge
typing_extensions 4.9.0 pyha770c72_0 conda-forge
tzcode 2024a h3f72095_0 conda-forge
tzdata 2024a h0c530f3_0 conda-forge
ucx 1.15.0 h75e419f_3 conda-forge
unicodedata2 15.1.0 py310h2372a71_0 conda-forge
uriparser 0.9.7 hcb278e6_1 conda-forge
urllib3 2.2.0 pyhd8ed1ab_0 conda-forge
wheel 0.42.0 pyhd8ed1ab_0 conda-forge
x264 1!164.3095 h166bdaf_2 conda-forge
x265 3.5 h924138e_3 conda-forge
xarray 2024.1.1 pyhd8ed1ab_0 conda-forge
xarray-datatree 0.0.14 pyhd8ed1ab_0 conda-forge
xarray-safe-rcm 2023.6.1 pypi_0 pypi
xarray-safe-s1 2024.1.9 pyhd8ed1ab_0 conda-forge
xcb-util 0.4.0 hd590300_1 conda-forge
xcb-util-image 0.4.0 h8ee46fc_1 conda-forge
xcb-util-keysyms 0.4.0 h8ee46fc_1 conda-forge
xcb-util-renderutil 0.3.9 hd590300_1 conda-forge
xcb-util-wm 0.4.1 h8ee46fc_1 conda-forge
xerces-c 3.2.5 hac6953d_0 conda-forge
xkeyboard-config 2.41 hd590300_0 conda-forge
xmlschema 3.0.1 pypi_0 pypi
xmltodict 0.13.0 pyhd8ed1ab_0 conda-forge
xorg-fixesproto 5.0 h7f98852_1002 conda-forge
xorg-inputproto 2.3.2 h7f98852_1002 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.1.1 hd590300_0 conda-forge
xorg-libsm 1.2.4 h7391055_0 conda-forge
xorg-libx11 1.8.7 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hd590300_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxfixes 5.0.3 h7f98852_1004 conda-forge
xorg-libxi 1.7.10 h7f98852_0 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
xorg-xextproto 7.3.0 h0b41bf4_1003 conda-forge
xorg-xf86vidmodeproto 2.3.1 h7f98852_1002 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xradarsat2 2023.6.13 pyhd8ed1ab_0 conda-forge
xrft 1.0.1 pyhd8ed1ab_0 conda-forge
xsar 2024.2.1 pyhd8ed1ab_0 conda-forge
xsarsea 0.9 py310hff52083_1 conda-forge
xyzservices 2023.10.1 pyhd8ed1ab_0 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7f98852_2 conda-forge
yarl 1.9.4 py310h2372a71_0 conda-forge
zict 3.0.0 pyhd8ed1ab_0 conda-forge
zipp 3.17.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 hd590300_5 conda-forge
zstd 1.5.5 hfc55251_0 conda-forge
file : /home/datawork-cersat-public/cache/project/sarwing/data/RS2/L1/VV_VH/2022/248/RS2_OK141302_PK1242225_DK1208539_SCWA_20220905_212400_VV_VH_SGF
When processing this file I got not always the same output. Sometimes ncview bugs when displaying owiWindSpeed var, sometimes not.
It seems that for RS2 files there sometimes are artifacts in the wind speed var.
In main.py
OUT_DEFAULT = "/home/datawork-cersat-public/cache/public/ftp/project/L2GRD/prod_test"
...
parser.add_argument('--outputdir', required=False, default=OUT_DEFAULT)
I suggest to remove OUT_DEFAULT and set required=True
When processing
/home/datawork-cersat-public/cache/project/mpc-sentinel1/data/esa/sentinel-1a/L1/IW/S1A_IW_GRDH_1S/2023/297/S1A_IW_GRDH_1SDV_20231024T004708_20231024T004737_050900_0622AE_3F98.SAFE
11/02/2024 06:23:15 INFO inversion.py(493) Traceback (most recent call last):
File "/home/datawork-cersat-public/cache/project/sarwing/commits/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/grdwindinversion/inversion.py", line 467, in makeL2
xsar_dataset = fct_dataset(
File "/home/datawork-cersat-public/cache/project/sarwing/commits/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xsar/sentinel1_dataset.py", line 289, in __init__
self.add_high_resolution_variables(
File "/home/datawork-cersat-public/cache/project/sarwing/commits/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xsar/sentinel1_dataset.py", line 476, in add_high_resolution_variables
self.add_gains(config["auxiliary_names"][self.sar_meta.short_name.split(":")[-2][0:3]][self.aux_config_name]["AUX_CAL"],
File "/home/datawork-cersat-public/cache/project/sarwing/commits/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xsar/sentinel1_dataset.py", line 566, in add_gains
path_aux_cal_new = get_path_aux_cal(new_aux_cal_name)
File "/home/datawork-cersat-public/cache/project/sarwing/commits/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xsar/utils.py", line 768, in get_path_aux_cal
path = os.path.join(config["auxiliary_dir"],
File "/home/datawork-cersat-public/cache/project/sarwing/commits/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/posixpath.py", line 76, in join
a = os.fspath(a)
TypeError: expected str, bytes or os.PathLike object, not NoneType
pip install -e .
SAR_L1-to-L2_wind_processor --input_file /home/datawork-cersat-public/cache/project/sarwing/data/RS2/L1/VV_VH/2022/248/RS2_OK141302_PK1242225_DK1208539_SCWA_20220905_212400_VV_VH_SGF --output_dir ./output_tests/
Traceback (most recent call last):
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/chain/l1_inversion_pip_env/bin/SAR_L1-to-L2_wind_processor", line 5, in <module>
from grdwindinversion.main import processor_starting_point
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/__init__.py", line 7, in <module>
from grdwindinversion import *
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/inversion.py", line 17, in <module>
from .load_config import getConf
File "/home/datawork-cersat-public/cache/project/sarwing/users/tcevaer/grdwindinversion/grdwindinversion/load_config.py", line 14, in <module>
stream = open(config_path, 'r')
FileNotFoundError: [Errno 2] No such file or directory: './data_config.yaml'
In inversion.py line 293:
print(owiNrcs_cross
When a netcdf is generated, a subdirectory is created (ie. S1A_IW_GRDH_1SDV_20230911T222130_20230911T222154_050286_060DC0_C12F.SAFE). It would be better if an option could enable/disable this behavior.
while processing a file, we observed that in outputfie, nesz = nesz_cross
ERROR inversion.py(185) Antimeridian crossing not yet checked
product tested: RS2/L1/VV_VH/2022/013/RS2_OK133121_PK1162214_DK1119226_SCWA_20220113_173154_VV_VH_SGF
For S1A_IW_GRDH_1SSV_20141004T211657_20141004T211722_002685_002FF5_E0BD.SAFE
Traceback (most recent call last):
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/variable.py", line 130, in as_variable
obj = Variable(*obj)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/variable.py", line 365, in __init__
super().__init__(
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/namedarray/core.py", line 253, in __init__
self._dims = self._parse_dimensions(dims)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/namedarray/core.py", line 481, in _parse_dimensions
raise ValueError(
ValueError: dimensions ('line', 'sample') must have the same length as the number of data dimensions, ndim=0
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/bin/SAR_L1-to-L2_wind_processor", line 8, in <module>
sys.exit(processor_starting_point())
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/grdwindinversion/main.py", line 66, in processor_starting_point
out_file,outputds = makeL2(input_file, out_folder, config_file, overwrite=args.overwrite,resolution = resolution, generateCSV = args.no_generate_csv)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/grdwindinversion/inversion.py", line 610, in makeL2
xr_dataset = xr_dataset.assign(
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/dataset.py", line 7062, in assign
data.update(results_data_vars)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/dataset.py", line 5624, in update
merge_result = dataset_update_method(self, other)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/merge.py", line 1075, in dataset_update_method
return merge_core(
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/merge.py", line 718, in merge_core
collected = collect_variables_and_indexes(aligned, indexes=indexes)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/merge.py", line 358, in collect_variables_and_indexes
variable = as_variable(variable, name=name)
File "/tmp/2024v2v1_0v9_0v2v3vpost6_1v0v7_1v0v6_1v0v5_1v1v11_1v0v1_1v0v1/grdwindinversion/lib/python3.10/site-packages/xarray/core/variable.py", line 132, in as_variable
raise error.__class__(
ValueError: Variable 'windspeed_cross': Could not convert tuple of form (dims, data[, attrs, encoding]): (['line', 'sample'], None) to Variable.
Using env :
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
affine 2.4.0 pyhd8ed1ab_0 conda-forge
aiohttp 3.9.1 py310h2372a71_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.10 hd590300_0 conda-forge
aom 3.8.1 h59595ed_0 conda-forge
async-timeout 4.0.3 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 23.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.15 h70caa3e_0 conda-forge
aws-c-cal 0.6.9 h14ec70c_3 conda-forge
aws-c-common 0.9.12 hd590300_0 conda-forge
aws-c-compression 0.2.17 h572eabf_8 conda-forge
aws-c-event-stream 0.4.1 h17cd1f3_5 conda-forge
aws-c-http 0.8.0 hc6da83f_5 conda-forge
aws-c-io 0.14.3 h3c8c088_1 conda-forge
aws-c-mqtt 0.10.1 h0ef3971_3 conda-forge
aws-c-s3 0.5.0 h1b46bed_2 conda-forge
aws-c-sdkutils 0.1.14 h572eabf_0 conda-forge
aws-checksums 0.1.17 h572eabf_7 conda-forge
aws-crt-cpp 0.26.1 h33f84b2_9 conda-forge
aws-sdk-cpp 1.11.242 h65f022c_0 conda-forge
azure-core-cpp 1.10.3 h91d86a7_1 conda-forge
azure-storage-blobs-cpp 12.10.0 h00ab1b0_0 conda-forge
azure-storage-common-cpp 12.5.0 hb858b4b_2 conda-forge
blosc 1.21.5 h0f2a231_0 conda-forge
bokeh 3.3.4 pyhd8ed1ab_0 conda-forge
branca 0.7.1 pyhd8ed1ab_0 conda-forge
brotli 1.1.0 hd590300_1 conda-forge
brotli-bin 1.1.0 hd590300_1 conda-forge
brotli-python 1.1.0 py310hc6cd4ac_1 conda-forge
bzip2 1.0.8 hd590300_5 conda-forge
c-ares 1.26.0 hd590300_0 conda-forge
ca-certificates 2024.2.2 hbcca054_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
cartopy 0.22.0 py310hcc13569_1 conda-forge
certifi 2024.2.2 pyhd8ed1ab_0 conda-forge
cfitsio 4.3.1 hbdc6101_0 conda-forge
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A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.