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Name: David Baux
Type: User
Company: @mobidic
Location: Montpellier
David Baux's Projects
autofastq
script to automate Illumina bcl2fastq utility
autonenufaar
Automate nenufaar
bam2cram-check
bamcramconvert
script to convert bam2cram and reverse using find and samtools
computedeltaesrseq
A simple Perl script to compute DeltaESRSeq to predict exon skipping induced by exonic variants
getgeneinfo
Perl script to retrieve various info form a list of HGNC genes, including exon coordinates or domain details. In particular generates a BED that can be use to design NGS experiences.
getpanelappstatus
get some info on the panelapp status of a gene list and panel ID form panelApp API
led
led_utilities
manifest2intervals
script to convert Illumina manifests (or BED) into intervals files.
mdutils
Utilities for MobiDetails
mobidetails
WebApp for DNA variants interpretation
nenufaar
DNA NGS pipeline
nenufaarity
singularity recipe for nenufaar container
ngs_designer
perl script to generate BED files for NGS experiments from an gene list
ponp_eval
Script to automatise Pathogenic-Or-Not Predictors assessment
snakemakedev
just to test snakemake
u2
USHVaM2: integrated genetics database system for deafness and blindness team in the Laboratory of Molecular Genetics, Montpellier University Hospital
wdldev
repos to test WDL
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