walaj / roverlaps Goto Github PK
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License: Other
Fast and memory efficient genomic range overlaps for R
License: Other
Hello,
I am trying to install roverlaps by running:
devtools::install_github("walaj/roverlaps")
By doing so I get the error below. Is there anything wrong I am doing you could possiby see from that message?
Many thanks
Jorge
Downloading GitHub repo walaj/roverlaps@master
Skipping 2 packages not available: GenomicRanges, S4Vectors
During startup - Warning message:
Setting LC_CTYPE failed, using "C"
v checking for file '/tmp/RtmpgxEjQP/remotes483b5fec7da3/walaj-roverlaps-73df10d/DESCRIPTION' ...
Installing package into '/mnt/lustre/scratch/home/usc/mg/jzb/SVABA/RLIBS'
(as 'lib' is unspecified)
Error: (converted from warning) Setting LC_CTYPE failed, using "C"
Execution halted
Error: Failed to install 'roverlaps' from GitHub:
(converted from warning) installation of package '/tmp/RtmpgxEjQP/file483b5c6f5700/roverlaps_0.1.1.tar.gz' had non-zero exit status
ls /tmp/RtmpgxEjQP/
install_github("walaj/roverlaps")
Error in install_github("walaj/roverlaps") :
could not find function "install_github"
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