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maize_subgenomes

maize_v4_te_annotation

scripts and intermediate files used to annotate TEs in Jiao et al.

mapping_snp_indel_calling

Mapping and SNP/Indel calling pipeline implementing BWA and GATK. Designed for use with the IWGSC pseudo chromosomal molecules reference sequence (chr 3B split at 480000000bp to allow compatibility with SAMtools reference indexing).

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

markdown-nice

支持主题设计的 Markdown 编辑器，让排版变 Nice

markdown-plus-plus

Markdown syntax highlighting for Notepad++, by customized UDL file (user defined language)

maser

Mapping Alternative Splicing Events to pRoteins

master_archive

Master project for the Molecular Life Sciences master in Bioinformatics, University of Lausanne

matchannot

Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.

matplotlib

matplotlib: plotting with Python

mavr

various bioinformatic instruments

mb-gatk-sge

SGE scripts / pipeline for running GATK/VEP on a cluster

mbsa

Multple methods for BSA Pipeline

mcscanx

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

mendel

孟德尔

metafunprimer

A qPCR primer design pipeline to target environmentally abundant functional genes

metamos

A metagenomic and isolate assembly and analysis pipeline built with AMOS

metamos-pipeline

method-matters-in-gene-family-evolution

methods_m.cerasi_r.padi_genome_assembly

Methods for genome paper

metingjs

:cake: A powerful plugin connect APlayer and Meting

mikado

Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

mindel

a reference genome-independent next-generation tool for cumulative InDel marker discovery

mingw-packages

Package scripts for MinGW-w64 targets to build under MSYS2.

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

mintty

The Cygwin Terminal – terminal emulator for Cygwin, MSYS, and WSL

miprimer

Webapp for design DNA primers for miRNA qPCR process

mira

MIRA sequence assembler

mirnaprimer

R package for designing miRNA primers.