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CytoTrajectory: Drug Screening Trajectory Tracking with Image-based Profile Interpretability using Variational Auto Encoders (VAEs)
In this line:
from cytotraj.utils.model_utils import load_data
load_data
cannot be imported because ModuleNotFoundError: No module named 'cytotraj'
is raised.
The sigmoid activation funtion can't capture the unbounded features that range outside [0, 1]
In the future, also consider adding hyperparameter optimization as well and other ways of improving the model learning
Originally posted by @MattsonCam in #1 (comment)
Once we have a working model, I will talk to Mike were we both can develop a hyper-parameter search using optuna.
This looks like it is tracking the training loss, also consider incorporating the validation loss
Originally posted by @MattsonCam in #1 (comment)
Currently, the code only checks for training loss. This issue focuses in developing a validation loss metric.
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