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scrapy-random-useragent

Scrapy Middleware to set a random User-Agent for every Request.

scrat

scripts_vcf

Scripts to handle and filter VCF files (intended for personal use)

shadowsocksr-csharp

single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

sjtu-courses

上海交通大学课程资料分享

splice

splitorfs

A workflow to computationally detect transcripts that could generate several distinct ORFs that match to the same protein. This can be used to find for example nonsense-mediated decay transcripts that make more than one ORF.

sqanti2

Private repo for Liz's modified SQANTI

stair

starsandclown

☀️Github星聚弃疗榜, 让吃瓜群众也能享受Github带来的乐趣~Github StarsAndClown, Let the people who eat me can enjoy the fun of Github~

starter-hugo-academic

stdeconvolve

Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data

structuralvariantannotation

R package designed to simplify structural variant analysis

suppa

SUPPA2: Fast quantification of differential splicing

suppa_supplementary_data

Supplementary data

tabula-muris-senis

Tabula Muris Senis

talon

Technology agnostic long read analysis pipeline for transcriptomes

tensorflow

An Open Source Machine Learning Framework for Everyone

tmap

Torrent Mapping Alignment Program

transcriptclean

Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome

trimd

TRIMD code to integrate Iso-Seq, RNA-Seq and deepCAGE data for transcriptome resolution

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly

ts

Torrent Suite

vcf2fasta

reference fasta to diploid fasta via SNPs in VCF

vcf_filter

Filter vcf files based on a list of SNPs

vcffilter

Filtering of polymorphisms according to thresholds of quality score, read depth and frequency of base calls

vgp-assembly

VGP repository for the genome assembly working group

wangzheng0822-algo

wenmm.github.io

💎 🐳 A super customizable Jekyll theme for personal site, team site, blog, project, documentation, etc.