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sarix-covid's Introduction

sarix-covid

Seasonal Auto-Regressive Integrated models with eXogenous predictors for forecasting Covid-19 hospitalizations

setup

  1. Install the following R packages from the CRAN Repository:
install.packages(c("dplyr", "lubridate", "readr", "ggplot2"))
  1. Install the covidData R package.
  2. Install the hubEnsembles R package.
  3. Install the covidHubUtils R package.
  4. Install the sarix python module:

workflow

  1. run make sarix in root directory
  2. submit forecast submission file from weekly-submission/sarix-forecasts/UMass-sarix/ to the COVID-19 Forecast Hub as a PR.
  3. commit and push the generated CSV file and the PDF of plots from the sarix model.

sarix-covid's People

Contributors

mkim425 avatar matthewcornell avatar wjallen avatar elray1 avatar

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