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BFDA Matlab Toolbox

Matlab toolbox for Bayesian functional data analysis using Gaussian-Wishart processes

Developed for Matlab 2014 or later

Required existing MATLAB packages for using this toolbox (included)

Add the path of required MATLAB packages

For example, run the following script lines (replace pwd with the directory of your MATLAB packages)

	addpath(genpath(cat(2, pwd, '/BFDA_SourceCode')))
	addpath(genpath(cat(2, pwd, '/bspline')))
	addpath(genpath(cat(2, pwd, '/fdaM'))) 
	addpath(genpath(cat(2, pwd, '/mcmcdiag'))) 
	addpath(genpath(cat(2, pwd, '/PACErelease2.11')))  

Main function of BFDA

  • BFDA_SourceCode/BFDA.m -- Main function for smoothing and mean-covariance estimation.

  • Examples/BayesianSmooth_eg.m Example script calling BFDA().

  • Examples/FdRegress_eg.m Example script calling fdaM regression functions with output from BFDA().

Simulation related functions

  • BFDA_SourceCode/sim_gfd.m Function to generate Gaussian functional data with common/partial grids, stationary/nonstationary covariance.

  • BFDA_SourceCode/sim_gfd_rgrid.m Function to generate Gaussian functional data with random grids, stationary/nonstationary covariance.

  • BFDA_SourceCode/sim_ngfd_rgrid.m Function to generate Non-Gaussian functional data with random grids, stationary/nonstationary covariance.

bfda's People

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