Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.

Project containing both the SONG microservice and CLI client. Both are written using JAVA 8 and Spring Boot.

$ mvn clean package

The source can be built and run using maven.

$ git clone [email protected]:icgc-dcc/SONG.git
$ cd SONG/song-server
$ mvn spring-boot:run -Dspring-boot.run.profiles=dev,test

Both the server and client when compiled and built produce uber jars which can be run easily from the command line.

$ java -jar song-server-0.1.1-SNAPSHOT.jar  --spring.profiles.active=dev,test

The server provides swagger docs documenting the API.

When running locally they can be accessed here: http://localhost:8080/swagger-ui.html

When running with the secure profile enabled, an oauth2 server is needed.

Test