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mmaomics

Trans-omics study on the rare inborn error of metabolism methylmalonic aciduria.

mujal_et_al_monomac_2021

ncomms_nsclc_scfibs

Code Associated with the Nature Communications Publication entitled "Single-cell analysis reveals prognostic fibroblast subpopulations linked to molecular and immunological subtypes of lung cancer"

nishino_dm_2022-multi-omics

nsclc-immunotherapy

osteosarcoma

The osteosarcoma analysis code

pan-metastasis

pan-nk

These are scripts for pan-cacner NK cells analyses.

pancaf

panmyeloid

papers

pathways

picture

proteomics

protocol

rogue

Assessing the purity of single cell population

sanbomics_scripts

scripts and notebooks from sanbomics

scell_lung_adenocarcinoma

This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset

scenic

scibet

A portable and fast single cell type identifier

scp

SCP provides a comprehensive set of tools for single cell data processing and downstream analysis.

scpdac

R code used to analyze single cell PDAC data

scplc

Codes for the scPLC project

scrna-of-npc

Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution

scrnaseq_escc

The code for processing single cell RNA-Seq dataset from ESCC cohorts

single-cell-metabolic-landscape-multi-omics

Pipeline for exploring metebolic heterogeneity at single-cell resolution

single-cell-papers-with-code

Papers with code for single cell related papers

single-cell-techniques

st_crc_cms

This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics technology

stringr