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Ani's Projects

r_for_biologists icon r_for_biologists

Scripts and data for Plotting in R for Biologists, a video course on YouTube

rh icon rh

Riemann Hypothesis book

rifdock icon rifdock

Rifdock Library for Conformational Search

rlibm-32 icon rlibm-32

RLibm for 32-bit representations (float and posit32)

rtsa icon rtsa

Ratio-based thermal shift assay

sars-cov-2 icon sars-cov-2

Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures

scccess icon scccess

Single-cell Consensus Clusters of Encoded Subspaces

scevan icon scevan

R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

scisorwiz icon scisorwiz

ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data

scmc icon scmc

R package for integrating and comparing multiple single cell genomic datasets

scomatic icon scomatic

A tool for detecting somatic variants in single cell data

scop3d icon scop3d

Sequence conservation of protein on 3D structure.

scripts icon scripts

Miscellaneous scripts moved from https://code.google.com/p/misccb/

scripts-1 icon scripts-1

Scripts to handle NGS data and other biological data

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