Supporting data and methods for Merchant et al 2020.
Visit the webpage: https://annaprotasio.github.io/Merchant_et_al_2020/
This repository includes details of the algorithms and programs used to analyse and display RNAseq data related to the publication Merchant et al 2020 .
00 - Location and description of RNAseq files.
01 - Mapping (STAR) and counting (featureCounts) commands.
02 - Differential Expression analysis (DESeq2) and data visualisation (ggplot2 and karyoplotteR)