anu-bioinfo Goto Github PK

jupyter

Jupyter metapackage for installation, docs and chat

kaggle-solutions

🏅 Collection of Kaggle Solutions and Ideas 🏅

keggtranslator

A Java-based software for visualizing and translating the KEGG PATHWAY database. Conversion of KGML files into BioPAX, SBML, GraphML, GML, and various other formats.

kineticlearning

Learning Kinetic Models from Time Series Proteomics and Metabolomics Data

knowledge-graph-learning

A curated list of awesome knowledge graph tutorials, projects and communities.

lanternfish

Deep convolutional neural networks for biological motion analysis

leakgan

The codes of paper "Long Text Generation via Adversarial Training with Leaked Information" on AAAI 2018. Text generation using GAN and Hierarchical Reinforcement Learning.

learning_sequence_motifs

"Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy

lectures

Oxford Deep NLP 2017 course

lime

Lime: Explaining the predictions of any machine learning classifier

literaturedl4graph

A comprehensive collection of recent papers on graph deep learning

longtarget

A bioinformatics tool written in C++ to predict the lncRNA/DNA binding motifs and binding sites.

machine-learning

Implementation of different ML Algorithms from scratch, written in Python 3.x

machine-learning-for-proteins

Listing of papers about machine learning for proteins.

machine-learning-for-trading

Notebooks, resources, and references accompanying the book Machine Learning for Algorithmic Trading

machine-learning-ifc

Machine Learning Workflow for Imaging Flow Cytometry (IFC)

machine-learning-resource

machine-learning-with-ontologies

magic

MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

making-it-rain

Cloud-based molecular simulations for everyone

mambo

mammalianmethylationconsortium

DNA methylation studies of mammalian species

man

Codes and data for the paper entitled "Learning representations of molecules to predict intermolecular interactions by constructing a large-scale heterogeneous molecular association network"

manuscript-transfer-signatures

marea

Metabolic feature extraction, enrichment and visualization of transcriptomic data

markerpen

Marker Gene Detection via Penalized Principal Component Analysis

masif

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

matchscore

maui

Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit

mc3