Comments (5)
DenisGoryunov
commented on May 27, 2024
Hi! Have you managed your SOAP installation?
from soapdenovo2.
chitiagarwal
commented on May 27, 2024
no
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aquaskyline
commented on May 27, 2024
If you are talking about soapaligner, use bioconda
https://anaconda.org/bioconda/soapaligner
…On Sat, Sep 25, 2021 at 2:25 AM chitiagarwal ***@***.***> wrote:
no
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DenisGoryunov
commented on May 27, 2024
Hi! Thank you so much for your reply. I've installed soapaligner 2.21 via conda, but i can not run it:
conda create --name SOAPaligner
conda activate SOAPaligner
conda install -n SOAPaligner -c bioconda/label/cf201901 soapaligner
soapaligner
-bash: soapaligner: command not found
Could you advise me please about correct way to run soap2 and 2bwt-builder within soapaligner package?
Many thanks,
Denis
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DenisGoryunov
commented on May 27, 2024
Sorry for bothering you! Now i got it.
I have to type "soap" instead of the "soapaligner"
Thank you again.
Regards,
Denis
from soapdenovo2.
Related Issues (20)
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