biowdl Goto Github PK
Name: BioWDL
Type: Organization
Bio: Bioinformatics workflows and tasks, written in WDL.
Location: Leiden
Name: BioWDL
Type: Organization
Bio: Bioinformatics workflows and tasks, written in WDL.
Location: Leiden
A docker image for hartwigmedical/hmftools' pave
A docker image for hartwigmedical's PEACH.
A docker image for hartwigmedical/hmftools' protect
A docker image based on py3.6-slim that includes pyyaml.
A docker image for hartwigmedical/hmftools' virus-interpreter
Docker container for https://github.com/sndrtj/wisecondor
A BioWDL workflow for quantifying expression. Category:Multi-Sample
Genomic Annotation of Metagenomic Sequences.
The BioWDL implemention of the GATK CNV calling workflow. Category:Multi-Sample
A BioWDL workflow for preprocessing BAM files for variantcalling. Based on the GATK Best Practices. Category:Single-Sample
A pipeline that calls variants on a group of BAM files. Category:Multi-Sample
Pipelines for generating biowdl test data.
A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample
A BioWDL workflow for generating a multisample VCF file from gVCF files.
Minimal is a Jekyll theme for GitHub Pages
A script to make FIFO files (pipes) with the maximum allowed buffer size
A pipeline for Oxford nanopore ont structural variant calling
Which tools to choose based on various performance metrics.
A Workflow for preprocessing PacBio reads. Category: Multi-Sample InDevelopment
Variant calling workflow for targetted PacBio read data. Category:Multi-Sample
A pipeline template for modular pipelines
A tool for pulling singularity images in HPC environments.
A BioWDL workflow for gathering QC metrics on and prepocessing FASTQ files. Category:Single-Sample
Maps reads back to an assembly, extracts mapped reads, and starts a new assembly.
This pipeline checks the coding potential of a RNA molecule with several tools.
A BioWDL pipeline for processing RNA-seq data, starting with FASTQ files to produce expression measures and VCFs. Category:Multi-Sample
Scripts for releasing, updating docs etc. in biowdl repos
A workflow for processing metagenomics data sets using Centrifuge. Category:Single-Sample
Creates a permanent cache for singularity images on disk.
Small rna pipeline. Category:Multi-Sample
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.