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algorithms's Introduction

Notes for UCSF BMI 203: Biocomputing Algorithms

Winter 2018

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Syllabus

Dates Topic
Jan 8 Complexity theory and Sorting
Jan 10 Github and Python
Jan 17 Graph theory
Jan 19 Paper Discussion
Jan 22 Discussion
Jan 24 Clustering
Jan 26 Paper Discussion
Jan 29 Discussion
Jan 31 Optimization: Overview, Global, Local Methods
Feb 2 Lab Session
Feb 5 Discussion
Feb 7 Hidden Markov Models
Feb 9 Paper Discussion
Feb 12 Discussion
Feb 14 Dynamic Programming
Feb 16 Lab Session
Feb 21 Machine Learning
Feb 26 Discussion
Feb 28 Machine Learning II
Mar 2 Paper Discussions
Mar 5 Discussion
Mar 7 Algorithms for Genetics and Genomics
Mar 9 Paper Discussion/Lab Session
Mar 12 Algorithms for Genetics and Genomics II
Mar 14 Lab Session
Mar 16 Lab Session

Paper discussions

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