cremoproduction / mevis Goto Github PK

if Avg - get p-value from ANNOVA [plot jitter plot with error bars (st.dev + avg)]
if Median - get p-value from Kruskal Wallis [plot jitter with box and quartile]
Output:

• plot Box plot and jitter plot with st.dev side by side
• plot volcano plot
• export xls file

line 276:279 calls in DifferenceNup_mean= c(DifferenceNup_mean, mean[mean$Chemical==Unique_Conditions[n,1],][1,2]/mean[mean$Chemical==prime_condition_name,][1,2]) "Chemical" column name.
Should be changed to call index name instead of column name that is not unique in defferent excel files.