ecustwy Goto Github PK

mitgcm

M.I.T General Circulation Model master code and documentation repository

mixed-effect-gams

Repo for tutorial/paper on mixed-effect GAMs

mlrmbo

Toolbox for Bayesian Optimization and Model-Based Optimization in R

mmemo

Scripts and data used in a study to assess the impact of various model enhancements on the performance of a hydro-sedimentological model.

nceflow

nemuro-gom

Quantifying spatiotemporal variability in zooplankton dynamics in the Gulf of Mexico with a physical-biogeochemical model

neuralecology

Code for the paper "Neural hierarchical models of ecological populations"

nmds

PluMA plugin to run Non-Multi-Dimensional Scaling (Kruskal, 1964)

nmds_shiny

App for fast NMDS plots

npcdon

Nutrient Phytoplankton Consumer Model with Dissolved Organic Nitrogen

numerical-modelling-in-marine-ecology

The repository contains Python code for Nutrient-Phytoplankton-Detritus model for marine ecosystem.

on-a-bayesian-change-point-detection-model-for-multivariate-data

Change point detection problem is key in anomaly detection, relevant and fast-growing. This R code implements a Bayesian approach to tackle this problem with multivariate data. Here are helper functions, validating simulations and two applications: Covid-19 and finance, as well as a report explaining the model.

openda

Open data assimilation toolbox

ostrich

An optimization toolkit for model calibration

ostrich-swmm

A toolset for connecting the OSTRICH optimization software toolkit with the SWMM simulation model.

overview_causal_inference

A Brief Overview of Causal Inference (xaringan presentation)

pestpp

tools for scalable and non-intrusive parameter estimation, uncertainty analysis and sensitivity analysis

phyre

PHYtoplankton-REsource (and Zooplankton) model for Python designed to simulate a mix of competitive dynamics between species and predator-prey interactions.

phyto1

Phytoplankton model 1

phytoann

The ANN-based diagnostic phytoplankton functional type model.

phytogrowthbyfba

scripts to implement simple phytoplankton growth models with flux balance analysis

piecewisesem

:exclamation: This is a read-only mirror of the CRAN R package repository. piecewiseSEM — Piecewise Structural Equation Modeling. Homepage: https://github.com/jslefche/ Report bugs for this package: https://github.com/jslefche/piecewiseSEM/issues

planktonbs

Differential Equation-Based Model for studying the seasonal succession of phytoplankton in the Bering Sea.

planktonmodels

Eco-evolutionary models of phytoplankton-zooplankton interactions

plotnine

A grammar of graphics for Python

pls_sem

pls-pm sem using seminr

plspm

R package plspm

ppso

R-package for optimization with Particle Swarm Optimization or Dynamically Dimensioned Search

pwrsem

Power Analysis for Parameter Estimation in Structural Equation Modeling: A Discussion and Tutorial

pygpc

A Sensitivity and uncertainty analysis toolbox for Python based on the generalized polynomial chaos method