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Name: Eric T. Dawson
Type: User
Company: @nvidia
Bio: Senior Scientist in Genomics, HPC and AI @nvidia
Twitter: erictdawson
Location: New York City
Blog: www.erictdawson.com
Name: Eric T. Dawson
Type: User
Company: @nvidia
Bio: Senior Scientist in Genomics, HPC and AI @nvidia
Twitter: erictdawson
Location: New York City
Blog: www.erictdawson.com
1️⃣🐝🏎️ The One Billion Row Challenge -- A fun exploration of how quickly 1B rows from a text file can be aggregated with Java
Affinity Propagation with Sparse Similarities
Similar genome assisted reassembly pipeline for PacBio long reads
A somatic mutation signature simulator
BASH logic for generating a coverage-reduced BAM file
QC methods for checking if two BAM files from the same sample
A read extraction and realignment tool for next generation sequencing data
Convert a BED file (and a FASTA reference) to *mostly* valid VCF.
A powerful toolset for genome arithmetic.
Workflows topic group BioHackathon 2020 mini-publication for https://BioHackrXiv.org
Fast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop
Dockerfiles for several SV callers and other miscellaneous bio apps.
A library of free open source icons for science illustrations in biology and chemistry
Tools, scripts and programs for playing with biological data
Scripts I use for analysis on NIH's Biowulf system.
C bit array structs and methods
Breakpoints via assembly - Identifies breaks and attempts to assemble rearrangements.
A method to identify structural variation from sequencing data in target regions
Extremely fast inplace radix sort
Reference bwa aln implementation for Agave API
bwa-mem2 + bwakit mapping flow
Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer
A single molecule sequence assembler for genomes large and small.
A simple bitset library in C
Core calling tools in a convenient docker image
A C/C++ library for fast interval overlap queries (with a "bedtools coverage" example)
Determine the biological sex of a human whole-genome BAM file
SDK for GPU accelerated genome assembly and analysis
Cloud monitoring tool and framework
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.