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šŸ‘‹ Hi there, I'm Florian!

Typing SVG

R Markdown Python Jupyter Visual Studio Code GitHub Docker Ubuntu

  • šŸŒ± Iā€™m currently learning šŸ‡ŖšŸ‡ø
  • šŸ’¬ Ask me about nextflow, spatial omics, single-cell, cardiovascular genetics, Rshiny and āš½
  • šŸ“« How to reach me: [email protected]
  • šŸ“¢ I speak šŸ‡©šŸ‡Ŗ šŸ‡¬šŸ‡§ šŸ‡«šŸ‡· and I am learning šŸ‡ŖšŸ‡ø

If you find anything in my repo useful and want to say thanks, you can "Buy Me A Coffee"

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Codewars

If you want to learn a new coding language, try out codewars. I am currently working on improving my python skills there.

Use this link to sign up and provide me with some Codewars honor in the process:

www.codewars.com/r/spwFaQ

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https://www.codewars.com/users/FloWuenne

Florian Wuennemann's Projects

semi-auto-image-annotation-tool icon semi-auto-image-annotation-tool

Anno-Mage: A Semi Automatic Image Annotation Tool which helps you in annotating images by suggesting you annotations for 80 object classes using a pre-trained model

seurat_genap2 icon seurat_genap2

Implementation of Seurat for Galaxy in GenAP2. Code is built upon the seurat package in the Galaxy tool shed.

shap icon shap

A game theoretic approach to explain the output of any machine learning model.

shinydocker icon shinydocker

Collection of shiny apps and DOCKER containers to build them for shinyproxy.

showcase icon showcase

Infrastructure as code implementation of the seqeralabs/showcase Workspace in Tower Cloud

sleuth icon sleuth

Inspect kallisto RNA-Seq output

spatialdata icon spatialdata

An open and universal framework for processing spatial omics data

startup-cto-handbook icon startup-cto-handbook

The Startup CTO's Handbook, a book covering leadership, management and technical topics for leaders of software engineering teams

test-datasets icon test-datasets

Test data to be used for automated testing with the nf-core pipelines

tetris icon tetris

My rendition of the classic tetris for terminal.

track-anything icon track-anything

Track-Anything is a flexible and interactive tool for video object tracking and segmentation, based on Segment Anything, XMem, and E2FGVI.

trades icon trades

Track to Detect and Segment: An Online Multi-Object Tracker (CVPR 2021)

visiumms icon visiumms

Study of Multiple Sclerosis(MS) using paried snRNA-seq and Visium transcriptmics datasets.

website_galaxy icon website_galaxy

UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)

xpra icon xpra

Xpra Remote Desktops for Graphic User Interface applications

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