Comments (9)
See also: https://agr-jira.atlassian.net/browse/SCRUM-3157
from web-gocam.
In discussion with @vanaukenk and @ukemi , @kltm will
- merge code; put out to prod
- update model URI
- do a doc check (now geneontology/go-site#1929)
- (if possible, enable HTTPS during this process as we are safely in AmiGO)
Otherwise, we'll take this as bugs and and fix as we find them as part of ongoing maintenance.
from web-gocam.
I'm having a little trouble building the code on prod. Likely caused by an older node/npm; will be digging into it.
from web-gocam.
After initially running into this error after a wipe and build
[13:22:04] 'compile_js_dev' errored after 35 ms
[13:22:04] TypeError: Cannot read property 'value' of undefined
at /home/bbop/local/src/git/amigo/gulpfile.js:322:45
at new Promise (<anonymous>)
at _client_compile_task (/home/bbop/local/src/git/amigo/gulpfile.js:297:12)
at /home/bbop/local/src/git/amigo/gulpfile.js:345:20
at Function._.map._.collect (/home/bbop/local/src/git/amigo/node_modules/underscore/underscore.js:172:24)
at compile_js_dev (/home/bbop/local/src/git/amigo/gulpfile.js:344:12)
at bound (domain.js:301:14)
at runBound (domain.js:314:12)
at asyncRunner (/home/bbop/local/src/git/amigo/node_modules/async-done/index.js:55:18)
at _combinedTickCallback (internal/process/next_tick.js:132:7)
[13:22:04] 'install' errored after 5.46 s
I was able to proceed with a second run of the command. All further wipe and build have not recreated this error, so there is some state I missed or the error is non-deterministic. Either way, pushing forward.
from web-gocam.
I jumped the gun on putting this out to production: we will need to have the updated code in the merged GO API out first.
from web-gocam.
@kltm just from top of my head, bbop gulp doesn't work for node more than 10
from web-gocam.
Fortunately, it seems to be a non-deterministic issue. The patch-up that @pkalita-lbl did allows us to compile on some of the older versions, including production. The issues we have now are with me jumping the gun on the API, not that we've switched to HTTPS.
from web-gocam.
http://model.geneontology.org/568b0f9600000284 should go to https://amigo.geneontology.org/amigo/model/568b0f9600000284
from web-gocam.
This now seems to function as expected.
from web-gocam.
Related Issues (20)
- GO-terms retrieved as values of enabled_by
- Redirects system via file HOT 6
- Choose representative GO-CAMs to show on the main page
- AWS SSL certificates migration HOT 2
- Gene product display on GO-CAM page not ideal ? HOT 5
- Technical planning: Handover of GO-CAM site HOT 8
- Handover of GO-CAM API HOT 7
- The GO-CAM browser just spins--no display created HOT 6
- Different numbers of GO-CAMs between User Page & Browse Page with filter
- Display only causal models on GO-CAM site HOT 14
- View button in /go-cam for model should point to Alliance Pathway Viewer HOT 12
- Remove GO-CAM download card from /go-cam site HOT 7
- Browse Page - GO-CAM with same user using multiple providedBy duplicates user name
- Access to development models
- Search by Gene Product and PMID HOT 2
- Several Features & Improvements HOT 7
- SIF Archive Download HOT 2
- GO-CAM Documentation
- Feedback HOT 3
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