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utility functions for analyzing (fly) calcium imaging data
Need to decide on a convenient format for describing these rois and then implement saving them as part of the imagingTimeseries dataclass.
This could be optional in computeDFF and the region used for computing the background should be passes as a mask.
xarrays appear to not be saved properly to file
I use to_netcdf to save the arrays (F0stack.to_netcdf(sep.join([savepath,'F0stack.nc']))
) and was planning to load them using open_dataset (xr.open_dataset(path2imgdat+sep+'F0stack.nc')
).
It's been a while since I debugged this, so further investigation is necessary.
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