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PythonInstallation

Step-by-step instructions to install Python and Jupyter notebooks.

Quickstart

  1. Install Miniforge 3

    • For the Mac (or Linux??) users, open a terminal and run these two lines of code (one line at a time!):
    curl -L -O "https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-$(uname)-$(uname -m).sh"
    bash Miniforge3-$(uname)-$(uname -m).sh
    

    or if that doesn't work for you:

    wget "https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-$(uname)-$(uname -m).sh"
    bash Miniforge3-$(uname)-$(uname -m).sh
    
    • For Windows users, download the installer by clicking this link. Then follow the prompts keeping all o the default settings.
  2. Download the environment file from this repository (click on file, then click on download button at top right of file display).

  3. Create the conda environment

    • Go to where the environment.yaml file is on your file system and run:

      mamba env create -f environment.yaml
      
    • If you are a Windows user, you will have to do this in the Miniforge Prompt. Find this by searching for it in your Start menu

  4. Test it out by opening a Jupyter notebook

    • Activate the environment: conda activate mbb121L
    • Start a Jupyter notebook by running: jupyter notebook

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