jbloomlab Goto Github PK
Name: jbloomlab
Type: Organization
Bio: Jesse Bloom's lab GitHub account
Twitter: jbloom_lab
Location: Seattle, WA, USA
Blog: https://jbloomlab.org/
Name: jbloomlab
Type: Organization
Bio: Jesse Bloom's lab GitHub account
Twitter: jbloom_lab
Location: Seattle, WA, USA
Blog: https://jbloomlab.org/
Align proteins to chains in PDB structures
manuscript for deep mutational scanning of Perth/2009 H3N2 HA
Mutational antigenic profiling of Perth/2009 H3 HA with monoclonal antibodies
Analysis of Perth/2009 H3 HA mutant libraries generated by reverse genetics
phylogenetic analyses informed by deep mutational scanning data
Software for inferring protein stabilities from phylogenies
Model mutational escape from polyclonal antibodies.
Additional data and code for generating figures in polyclonal paper
paper on the RBD escape calculator
analyze sharing of read pairs across samples in Poon et al (2016) paper
A python script for computing TCID50 using the Reed-Muench formula
Analyze a mutant library based on the results from Sanger sequencing some selected clones
Mapping mutations to the SARS-CoV-2 B.1.351 RBD that reduce binding of polyclonal plasmas from B.1.351-convalescent individuals
Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
DMS of the Omicron BA.1 and BA.2 RBDs
Mutational antigenic profiling of AZD8895 and AZD1061
Mutational antigenic profiling of SARS-CoV-2 RBD against REGN-COV2 and LY-CoV016
Mutational antigenic profiling of Crowe-lab antibodies to SARS-CoV-2 RBD
Mutational antigenic profiling of RBD escape mutations from Ali Ellebedy antibodies tested in vivo
Mutational antigenic profiling of SARS-CoV-2 RBD against human convalescent sera from the HAARVI cohort
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