Related Issues (20)
- ultra installation and run error HOT 7
- CIGAR string starts/ends with N HOT 7
- Mapping with uLTRA without GTF? HOT 3
- Cigar is None HOT 2
- BUG -4294967296 HOT 8
- Controlling (high) uLTRA RAM usage HOT 1
- a bug of `--alignment_threshold` HOT 1
- Out of bound reads HOT 13
- Genomes FASTA/GTF files needed to run the evaluation HOT 4
- Can not access local variable 'read_mems_tmp' when using --use_NAM_seeds HOT 2
- Error: invalid feature coordinates (end<start!) at line: HOT 1
- Bug with uLTRA align : TypeError: bad argument type for built-in operation HOT 3
- UnboundLocalError: local variable 'i' referenced before assignment HOT 4
- Can I use ultra to align est to references HOT 1
- error when aligning direct RNA data during revcomp script HOT 3
- KeyError when running test pipeline HOT 3
- How to control minimap 2 parameters during uLTRA alignment HOT 6
- uLTRA + SQANTI3 HOT 2
- Non-absolute paths don't resolve HOT 5
- Python bindings? HOT 1
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from ultra.