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View Code? Open in Web Editor NEWKnime workflow to facilitate segmentation and tracking in 3D + time cell images using the TGMM 1.0 software by the Keller lab (https://www.janelia.org/lab/keller-lab).
Knime workflow to facilitate segmentation and tracking in 3D + time cell images using the TGMM 1.0 software by the Keller lab (https://www.janelia.org/lab/keller-lab).
We know we can call ProcessStack.exe with a config file, or with a bin file to generate a tiff-file with the mask of the superpixels.
But we did not try calling the signature
ProcessStack imageFilename medianFilterRadius background connectivity
Just press enter directly after typing ProcessStack.exe to see the proposed signature.
Can be used to process single timepoints.
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