This is a project-specific repo, not a general tool. Segmenting neurons in 3D data. Trying to make it easy to play with and modify ... because my data is tricky and I'll have to do lots of adjustments ๐ญ
You can install stable versions of neurofix
via pip:
pip install neurofix
Or, for the most recent and possibly unstable version, clone this github and run a local pip install.
Here will be some explanation of our data and our problem.
Contributions are very welcome. Tests can be run with [tox], please ensure the coverage at least stays the same before you submit a pull request.
Distributed under the terms of the [BSD-3] license,
neurofix
is free and open source software