lightning-auriga / statgen-mi Goto Github PK

once pytest is operational, get this thing running with circle

pipeline scripts are mostly structured in readiness for pytest, but test implementation is still required

depending on how interested I am in this, may add the old snptest frequentist options back in here for testing purposes

I had tried modding some randomization support into bcftools +setGT, but the solution was rather ephemeral and not kept in sync with upstream. Not sure how I want to approach this, but since this project is unlikely to ever be used, I guess it's not a rush :)

while in theory this is supported, no actual cooked in tests are currently configured, so something is most certainly broken in there somewhere

this package was once intended to be used in part with LMM tools. the tools have entirely changed in the intervening time, but the idea still stands.